Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 ANKRD36P1-201ENST00000344424 659 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL161449.1-201ENST00000414531 1199 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL513325.1-201ENST00000417716 1034 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 BTF3L4P3-201ENST00000418879 476 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 GLUD1P9-201ENST00000420997 1173 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 FGL1-205ENST00000427924 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 RPS2P35-201ENST00000443417 897 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 GYG1P3-201ENST00000449769 994 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 TPMTP4-201ENST00000450749 678 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AC092001.1-201ENST00000453012 261 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL390026.1-201ENST00000456647 457 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AC037441.2-201ENST00000522805 898 ntTSL 3 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC02552-201ENST00000536529 652 ntTSL 3 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 GNG2-208ENST00000554875 430 ntTSL 5 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AC087477.5-201ENST00000558246 562 ntTSL 3 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 OR11K1P-201ENST00000558299 904 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AC011731.1-201ENST00000585184 389 ntTSL 3 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AC015911.5-201ENST00000587076 451 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 MTATP6P2-201ENST00000603319 678 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AC073648.5-201ENST00000603502 305 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 Metazoa_SRP.119-201ENST00000613387 291 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AC138932.5-201ENST00000617759 563 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 DUXAP9-208ENST00000622815 614 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL354702.2-203ENST00000641963 514 ntBASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 HSFY1-204ENST00000382856 1374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC11.62□□□□□ -0.55
KRTAP3-3Q9BYR6 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 IL24-204ENST00000391929 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC109326.1-201ENST00000624705 1321 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 EXOSC9-202ENST00000379663 1529 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 EXOSC9-211ENST00000512454 1543 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AL449266.1-201ENST00000357393 557 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 RPL12P1-201ENST00000374520 498 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 RPL22P18-201ENST00000417197 377 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 TPM3P4-201ENST00000425942 755 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC00578-204ENST00000446548 519 ntTSL 4 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AL024493.1-201ENST00000449217 833 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC02561-201ENST00000449457 692 ntTSL 3 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 PPP1R2P6-201ENST00000478565 588 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 COX17-203ENST00000484810 471 ntTSL 2 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 NR1I3-230ENST00000511944 620 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 RNU6-720P-201ENST00000516363 108 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC099730.1-201ENST00000525269 1177 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 OR4A50P-201ENST00000526321 908 ntBASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC11.61□□□□□ -0.55
KRTAP3-3Q9BYR6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms