Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP4Q9BWG4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 AL355472.2-201ENST00000422958 438 ntBASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SSBP4Q9BWG4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 AC008894.3-201ENST00000624324 3103 ntBASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 AC008694.1-202ENST00000636953 945 ntBASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 AC010980.2-201ENST00000587099 1412 ntBASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 AC080080.1-201ENST00000625121 2420 ntBASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSBP4Q9BWG4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP4Q9BWG4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms