Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
LIMD2Q9BT23 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 NBPF21P-201ENST00000425093 1451 ntBASIC11.15□□□□□ -0.62
LIMD2Q9BT23 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 AC239809.2-201ENST00000415381 517 ntBASIC11.15□□□□□ -0.62
LIMD2Q9BT23 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 AC026366.1-201ENST00000488803 879 ntBASIC11.15□□□□□ -0.62
LIMD2Q9BT23 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 TP73-202ENST00000354437 2140 ntTSL 5 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LIMD2Q9BT23 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LIMD2Q9BT23 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC11.15□□□□□ -0.63
LIMD2Q9BT23 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LIMD2Q9BT23 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
LIMD2Q9BT23 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC11.15□□□□□ -0.63
LIMD2Q9BT23 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
LIMD2Q9BT23 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LIMD2Q9BT23 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms