Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 AC239809.2-201ENST00000415381 517 ntBASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 AC004980.1-204ENST00000429707 299 ntBASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 AC093677.2-201ENST00000600169 1863 ntBASIC17.61■□□□□ 0.41
CPPED1Q9BRF8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.6■□□□□ 0.41
CPPED1Q9BRF8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 AC026366.1-201ENST00000488803 879 ntBASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 AC131212.4-201ENST00000623606 975 ntBASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.59■□□□□ 0.41
CPPED1Q9BRF8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPPED1Q9BRF8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.58■□□□□ 0.41
CPPED1Q9BRF8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPPED1Q9BRF8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPPED1Q9BRF8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.58■□□□□ 0.41
CPPED1Q9BRF8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPPED1Q9BRF8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CPPED1Q9BRF8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.58■□□□□ 0.4
CPPED1Q9BRF8 AL355802.2-201ENST00000402069 882 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms