Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.21□□□□□ -0.13
VGLL1Q99990 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.21□□□□□ -0.13
VGLL1Q99990 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.21□□□□□ -0.13
VGLL1Q99990 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.21□□□□□ -0.13
VGLL1Q99990 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.21□□□□□ -0.13
VGLL1Q99990 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
VGLL1Q99990 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VGLL1Q99990 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VGLL1Q99990 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VGLL1Q99990 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.21□□□□□ -0.14
VGLL1Q99990 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
VGLL1Q99990 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
VGLL1Q99990 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VGLL1Q99990 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
VGLL1Q99990 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VGLL1Q99990 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VGLL1Q99990 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VGLL1Q99990 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.2□□□□□ -0.14
VGLL1Q99990 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.2□□□□□ -0.14
VGLL1Q99990 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VGLL1Q99990 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VGLL1Q99990 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VGLL1Q99990 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.2□□□□□ -0.14
VGLL1Q99990 UNC93B4-201ENST00000505679 747 ntBASIC14.2□□□□□ -0.14
VGLL1Q99990 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.2□□□□□ -0.14
VGLL1Q99990 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.2□□□□□ -0.14
VGLL1Q99990 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.2□□□□□ -0.14
VGLL1Q99990 HLA-A-209ENST00000638375 975 ntBASIC14.2□□□□□ -0.14
VGLL1Q99990 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.2□□□□□ -0.14
VGLL1Q99990 PCDHB18P-201ENST00000524813 2368 ntBASIC14.2□□□□□ -0.14
VGLL1Q99990 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VGLL1Q99990 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
VGLL1Q99990 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.2□□□□□ -0.14
VGLL1Q99990 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VGLL1Q99990 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.2□□□□□ -0.14
VGLL1Q99990 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VGLL1Q99990 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.19□□□□□ -0.14
VGLL1Q99990 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
VGLL1Q99990 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.19□□□□□ -0.14
VGLL1Q99990 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.19□□□□□ -0.14
VGLL1Q99990 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.19□□□□□ -0.14
VGLL1Q99990 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.19□□□□□ -0.14
VGLL1Q99990 PRKY-204ENST00000533551 1019 ntBASIC14.19□□□□□ -0.14
VGLL1Q99990 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.19□□□□□ -0.14
VGLL1Q99990 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.19□□□□□ -0.14
VGLL1Q99990 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.19□□□□□ -0.14
VGLL1Q99990 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VGLL1Q99990 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VGLL1Q99990 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VGLL1Q99990 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms