Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PHOX2BQ99453 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.89■□□□□ 0.61
PHOX2BQ99453 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 FP700111.2-201ENST00000619190 1892 ntBASIC18.88■□□□□ 0.61
PHOX2BQ99453 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 YBX2P1-201ENST00000394192 760 ntBASIC18.88■□□□□ 0.61
PHOX2BQ99453 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 KRT18P28-201ENST00000453838 1332 ntBASIC18.88■□□□□ 0.61
PHOX2BQ99453 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 Z83836.1-201ENST00000624605 1642 ntBASIC18.88■□□□□ 0.61
PHOX2BQ99453 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHOX2BQ99453 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.88■□□□□ 0.61
PHOX2BQ99453 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 AL136038.4-201ENST00000603606 1261 ntBASIC18.87■□□□□ 0.61
PHOX2BQ99453 AL391807.1-203ENST00000604392 2365 ntBASIC18.87■□□□□ 0.61
PHOX2BQ99453 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 IGHV3-41-201ENST00000613121 348 ntBASIC18.87■□□□□ 0.61
PHOX2BQ99453 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.87■□□□□ 0.61
PHOX2BQ99453 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHOX2BQ99453 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 TMEM179-206ENST00000616017 1645 ntBASIC18.86■□□□□ 0.61
PHOX2BQ99453 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 METTL21AP1-201ENST00000438852 635 ntBASIC18.86■□□□□ 0.61
PHOX2BQ99453 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 RFPL4AP1-201ENST00000530883 850 ntBASIC18.86■□□□□ 0.61
PHOX2BQ99453 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 Z69720.1-201ENST00000601483 472 ntBASIC18.86■□□□□ 0.61
PHOX2BQ99453 AC116407.3-201ENST00000623905 1129 ntBASIC18.86■□□□□ 0.61
PHOX2BQ99453 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms