Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.3■□□□□ 0.68
CSPG4P5Q96PW8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.3■□□□□ 0.68
CSPG4P5Q96PW8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG4P5Q96PW8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG4P5Q96PW8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG4P5Q96PW8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 KRT8P45-201ENST00000414328 1447 ntBASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 TSPY14P-201ENST00000303979 915 ntBASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 MIR564-202ENST00000385049 94 ntBASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 CCR12P-201ENST00000446203 998 ntBASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG4P5Q96PW8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 AC116562.4-202ENST00000641738 218 ntBASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 AC073592.3-201ENST00000625118 1834 ntBASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CSPG4P5Q96PW8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 AC112777.1-201ENST00000540175 1423 ntBASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 MMP23A-201ENST00000234610 1017 ntBASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 INGX-201ENST00000359239 846 ntBASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 AC007663.1-201ENST00000438948 1240 ntBASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 MIR3180-5-201ENST00000583743 153 ntBASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 AC010947.1-201ENST00000623454 693 ntBASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 NEFHP1-201ENST00000412845 2629 ntBASIC19.27■□□□□ 0.68
CSPG4P5Q96PW8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG4P5Q96PW8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG4P5Q96PW8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
CSPG4P5Q96PW8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG4P5Q96PW8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.27■□□□□ 0.67
CSPG4P5Q96PW8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG4P5Q96PW8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CSPG4P5Q96PW8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CSPG4P5Q96PW8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSPG4P5Q96PW8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.26■□□□□ 0.67
CSPG4P5Q96PW8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSPG4P5Q96PW8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.26■□□□□ 0.67
CSPG4P5Q96PW8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms