Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 AC113347.1-201ENST00000413321 391 ntBASIC15.55■□□□□ 0.08
GAFA1Q96PS6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 AC005363.2-201ENST00000618631 242 ntBASIC15.55■□□□□ 0.08
GAFA1Q96PS6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 AC034236.2-201ENST00000606662 1610 ntBASIC15.54■□□□□ 0.08
GAFA1Q96PS6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 AC009947.2-201ENST00000444014 672 ntBASIC15.54■□□□□ 0.08
GAFA1Q96PS6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 AC010203.1-204ENST00000548782 407 ntBASIC15.54■□□□□ 0.08
GAFA1Q96PS6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 AL138781.2-201ENST00000617896 1843 ntBASIC15.54■□□□□ 0.08
GAFA1Q96PS6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GAFA1Q96PS6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 LIN28AP1-201ENST00000429574 405 ntBASIC15.53■□□□□ 0.08
GAFA1Q96PS6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 AL499627.1-201ENST00000569373 2188 ntBASIC15.53■□□□□ 0.08
GAFA1Q96PS6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GAFA1Q96PS6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GAFA1Q96PS6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms