Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 KRT8P10-201ENST00000450021 1447 ntBASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LRRC3BQ96PB8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 FAAHP1-202ENST00000446499 1238 ntBASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 AC012615.1-201ENST00000565797 1299 ntBASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 MIR3180-4-201ENST00000582223 153 ntBASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 AL031008.1-201ENST00000619963 541 ntBASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 AC007952.6-201ENST00000573168 2673 ntBASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 AC003957.1-201ENST00000625108 2673 ntBASIC19.13■□□□□ 0.65
LRRC3BQ96PB8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 AL032819.2-201ENST00000624543 2162 ntBASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 IGHGP-201ENST00000390555 1178 ntBASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 KRT18P31-201ENST00000506277 1292 ntBASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 AC091304.2-201ENST00000564639 760 ntBASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 AC090616.6-201ENST00000582640 721 ntBASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 IGHV3-41-201ENST00000613121 348 ntBASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC3BQ96PB8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 AC079781.3-201ENST00000449110 356 ntBASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 AL357033.4-201ENST00000617703 1807 ntBASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRRC3BQ96PB8 AC093484.2-201ENST00000580996 2166 ntBASIC19.1■□□□□ 0.65
LRRC3BQ96PB8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3BQ96PB8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3BQ96PB8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3BQ96PB8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3BQ96PB8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3BQ96PB8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC3BQ96PB8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC3BQ96PB8 AC233702.3-201ENST00000578656 1387 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms