Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACAP3Q96P50 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACAP3Q96P50 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ACAP3Q96P50 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.29■□□□□ 0.84
ACAP3Q96P50 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.29■□□□□ 0.84
ACAP3Q96P50 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.29■□□□□ 0.84
ACAP3Q96P50 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ACAP3Q96P50 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ACAP3Q96P50 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACAP3Q96P50 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ACAP3Q96P50 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ACAP3Q96P50 HEIH-201ENST00000623091 1652 ntBASIC20.29■□□□□ 0.84
ACAP3Q96P50 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACAP3Q96P50 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACAP3Q96P50 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ACAP3Q96P50 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 STARP1-201ENST00000397973 869 ntBASIC20.28■□□□□ 0.84
ACAP3Q96P50 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 KRT18P38-201ENST00000449496 1282 ntBASIC20.28■□□□□ 0.84
ACAP3Q96P50 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 MYC-208ENST00000641036 567 ntBASIC20.28■□□□□ 0.84
ACAP3Q96P50 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ACAP3Q96P50 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACAP3Q96P50 KRT8P7-201ENST00000533003 1432 ntBASIC20.27■□□□□ 0.84
ACAP3Q96P50 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.27■□□□□ 0.84
ACAP3Q96P50 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.27■□□□□ 0.84
ACAP3Q96P50 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 KRT18P23-201ENST00000435622 1283 ntBASIC20.27■□□□□ 0.84
ACAP3Q96P50 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.27■□□□□ 0.84
ACAP3Q96P50 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.27■□□□□ 0.84
ACAP3Q96P50 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACAP3Q96P50 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ACAP3Q96P50 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.27■□□□□ 0.83
ACAP3Q96P50 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACAP3Q96P50 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACAP3Q96P50 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACAP3Q96P50 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.27■□□□□ 0.83
ACAP3Q96P50 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
ACAP3Q96P50 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 AL031133.1-201ENST00000406807 723 ntBASIC20.26■□□□□ 0.83
ACAP3Q96P50 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 AC034232.1-201ENST00000506026 1064 ntBASIC20.26■□□□□ 0.83
ACAP3Q96P50 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.26■□□□□ 0.83
ACAP3Q96P50 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 AC034236.2-201ENST00000606662 1610 ntBASIC20.26■□□□□ 0.83
ACAP3Q96P50 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACAP3Q96P50 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ACAP3Q96P50 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACAP3Q96P50 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms