Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 AL162741.1-201ENST00000565563 1558 ntBASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPIP1Q96JH7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 UNC93B2-201ENST00000285383 730 ntBASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 FAM210CP-201ENST00000445714 574 ntBASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 MCCD1P1-208ENST00000445732 328 ntBASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 MIR4785-201ENST00000585005 73 ntBASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 GPAT2P1-201ENST00000444924 1672 ntBASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.71■□□□□ 0.75
VCPIP1Q96JH7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 AP000593.1-201ENST00000393668 712 ntBASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 AC211429.1-201ENST00000415277 523 ntBASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPIP1Q96JH7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 SLC25A1P2-201ENST00000430693 912 ntBASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 RBM17P1-201ENST00000453646 1190 ntBASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 AL023803.3-201ENST00000615559 522 ntBASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCPIP1Q96JH7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms