Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC47A1Q96FL8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 TSPY21P-201ENST00000433481 731 ntBASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 PRKY-204ENST00000533551 1019 ntBASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 AC008764.6-201ENST00000595909 2069 ntBASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC47A1Q96FL8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 ID1-201ENST00000376105 1233 ntBASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC47A1Q96FL8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.64■□□□□ 0.42
SLC47A1Q96FL8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.64■□□□□ 0.42
SLC47A1Q96FL8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC47A1Q96FL8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms