Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.7■□□□□ 0.74
ATP2A3Q93084 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.7■□□□□ 0.74
ATP2A3Q93084 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ATP2A3Q93084 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A3Q93084 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A3Q93084 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A3Q93084 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2A3Q93084 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 KRT8P45-201ENST00000414328 1447 ntBASIC19.69■□□□□ 0.74
ATP2A3Q93084 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 AL023973.1-201ENST00000624619 620 ntBASIC19.69■□□□□ 0.74
ATP2A3Q93084 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A3Q93084 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.69■□□□□ 0.74
ATP2A3Q93084 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A3Q93084 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.68■□□□□ 0.74
ATP2A3Q93084 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATP2A3Q93084 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 AL032819.2-201ENST00000624543 2162 ntBASIC19.67■□□□□ 0.74
ATP2A3Q93084 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 AL441883.1-201ENST00000566170 1045 ntBASIC19.67■□□□□ 0.74
ATP2A3Q93084 AC008622.2-201ENST00000617006 1229 ntBASIC19.67■□□□□ 0.74
ATP2A3Q93084 AL121956.5-201ENST00000625261 221 ntBASIC19.67■□□□□ 0.74
ATP2A3Q93084 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms