Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 LETM1P2-201ENST00000597330 2178 ntBASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK2A3Q8NEV1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 PRORSD1P-201ENST00000295112 541 ntBASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 RCC2P6-201ENST00000526625 1557 ntBASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 AP001412.1-201ENST00000608405 714 ntBASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK2A3Q8NEV1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 AC079598.2-202ENST00000546624 1451 ntBASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 AC083906.6-201ENST00000641366 219 ntBASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK2A3Q8NEV1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms