Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RTL9Q8NET4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.04■■□□□ 1.28
RTL9Q8NET4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.03■■□□□ 1.28
RTL9Q8NET4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.03■■□□□ 1.28
RTL9Q8NET4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RTL9Q8NET4 FDX1P1-201ENST00000449115 551 ntBASIC23.03■■□□□ 1.28
RTL9Q8NET4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.03■■□□□ 1.28
RTL9Q8NET4 UNC93B7-201ENST00000509439 705 ntBASIC23.03■■□□□ 1.28
RTL9Q8NET4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.03■■□□□ 1.28
RTL9Q8NET4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.03■■□□□ 1.28
RTL9Q8NET4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.03■■□□□ 1.28
RTL9Q8NET4 PRELID1P1-202ENST00000567272 903 ntBASIC23.03■■□□□ 1.28
RTL9Q8NET4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.03■■□□□ 1.28
RTL9Q8NET4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.03■■□□□ 1.28
RTL9Q8NET4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTL9Q8NET4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.02■■□□□ 1.28
RTL9Q8NET4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.02■■□□□ 1.28
RTL9Q8NET4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
RTL9Q8NET4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RTL9Q8NET4 PCDHAC2-203ENST00000615316 3011 ntBASIC23.02■■□□□ 1.28
RTL9Q8NET4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.02■■□□□ 1.28
RTL9Q8NET4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.02■■□□□ 1.28
RTL9Q8NET4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.02■■□□□ 1.28
RTL9Q8NET4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RTL9Q8NET4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTL9Q8NET4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 TSPY22P-201ENST00000427496 604 ntBASIC23.01■■□□□ 1.27
RTL9Q8NET4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 AL390719.2-201ENST00000606993 987 ntBASIC23.01■■□□□ 1.27
RTL9Q8NET4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 KRT8P50-201ENST00000562022 1438 ntBASIC23.01■■□□□ 1.27
RTL9Q8NET4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 AP002414.4-201ENST00000589764 1148 ntBASIC23.01■■□□□ 1.27
RTL9Q8NET4 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RTL9Q8NET4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTL9Q8NET4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RTL9Q8NET4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23■■□□□ 1.27
RTL9Q8NET4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms