Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM42Q8IWZ5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 MYC-208ENST00000641036 567 ntBASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM42Q8IWZ5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 GNAS-203ENST00000306120 1878 ntBASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 SLC25A6P5-201ENST00000435663 894 ntBASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM42Q8IWZ5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
TRIM42Q8IWZ5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.64■□□□□ 0.58
TRIM42Q8IWZ5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.64■□□□□ 0.58
TRIM42Q8IWZ5 ESPNP-201ENST00000270691 2015 ntBASIC18.64■□□□□ 0.58
TRIM42Q8IWZ5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 HEIH-201ENST00000623091 1652 ntBASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 MIPEPP3-201ENST00000412105 444 ntBASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 BX276092.2-201ENST00000417668 665 ntBASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 AL356309.3-201ENST00000624132 1934 ntBASIC18.64■□□□□ 0.57
TRIM42Q8IWZ5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms