Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 NIFKP9-201ENST00000419265 221 ntBASIC17.55■□□□□ 0.4
CCDC71Q8IV32 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 KSR1P1-201ENST00000446298 240 ntBASIC17.55■□□□□ 0.4
CCDC71Q8IV32 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 AC145285.6-201ENST00000604632 637 ntBASIC17.55■□□□□ 0.4
CCDC71Q8IV32 AC005363.2-201ENST00000618631 242 ntBASIC17.55■□□□□ 0.4
CCDC71Q8IV32 IRX1P1-201ENST00000438849 1838 ntBASIC17.55■□□□□ 0.4
CCDC71Q8IV32 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 KRT16P1-201ENST00000399124 1418 ntBASIC17.55■□□□□ 0.4
CCDC71Q8IV32 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC71Q8IV32 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 LINC01568-207ENST00000641790 1380 ntBASIC17.53■□□□□ 0.4
CCDC71Q8IV32 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 AC138932.1-201ENST00000534164 6830 ntBASIC17.53■□□□□ 0.4
CCDC71Q8IV32 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 AC104417.2-201ENST00000562989 1793 ntBASIC17.53■□□□□ 0.4
CCDC71Q8IV32 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC71Q8IV32 TFP1-202ENST00000475455 1573 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms