Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 NSUN5P1-202ENST00000421140 1535 ntBASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 NSUN5P2-203ENST00000457352 1529 ntBASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 AC027796.2-201ENST00000575326 344 ntBASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 MIR564-202ENST00000385049 94 ntBASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 AL691403.2-201ENST00000618460 490 ntBASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13BQ7Z7G8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 Z69720.1-201ENST00000601483 472 ntBASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms