Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.8■□□□□ 0.6
LYSMD3Q7Z3D4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 HMGA1P5-201ENST00000412453 271 ntBASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 SLC25A3P1-201ENST00000443844 931 ntBASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 MTMR9LP-203ENST00000426597 1545 ntBASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 AL109659.2-201ENST00000606809 1674 ntBASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
LYSMD3Q7Z3D4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 AC036111.1-201ENST00000533973 1582 ntBASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 KRT8P45-201ENST00000414328 1447 ntBASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 AC005363.2-201ENST00000618631 242 ntBASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 CROCCP3-202ENST00000420820 1947 ntBASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD3Q7Z3D4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 CR769767.2-201ENST00000622735 460 ntBASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD3Q7Z3D4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD3Q7Z3D4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms