Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDZRN4Q6ZMN7 AC093525.10-201ENST00000625130 1569 ntBASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 PRKY-204ENST00000533551 1019 ntBASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDZRN4Q6ZMN7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 ABALON-201ENST00000629058 1903 ntBASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 AC233702.5-201ENST00000584107 538 ntBASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDZRN4Q6ZMN7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 RPS2P55-201ENST00000397318 883 ntBASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 SNORA78-201ENST00000459373 127 ntBASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 AC107956.1-201ENST00000494359 873 ntBASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 AL121829.2-201ENST00000620908 328 ntBASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDZRN4Q6ZMN7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDZRN4Q6ZMN7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms