Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 KRT18P38-201ENST00000449496 1282 ntBASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 AC034232.1-201ENST00000506026 1064 ntBASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 MYC-208ENST00000641036 567 ntBASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 AC006333.2-201ENST00000607957 2099 ntBASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.78■□□□□ 0.6
GDPD4Q6W3E5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDPD4Q6W3E5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
GDPD4Q6W3E5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
GDPD4Q6W3E5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.77■□□□□ 0.59
GDPD4Q6W3E5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 Z98044.1-201ENST00000632503 1764 ntBASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDPD4Q6W3E5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 AL031133.1-201ENST00000406807 723 ntBASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 SPDYE15P-201ENST00000424157 909 ntBASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 RASA4DP-201ENST00000460726 1199 ntBASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 AC104390.1-201ENST00000555663 520 ntBASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDPD4Q6W3E5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.74■□□□□ 0.59
GDPD4Q6W3E5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDPD4Q6W3E5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.74■□□□□ 0.59
GDPD4Q6W3E5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms