Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 AL390719.1-204ENST00000412397 1219 ntBASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXR1Q6PIV2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 AC018695.7-201ENST00000624587 2492 ntBASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 AC012618.2-201ENST00000428058 849 ntBASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 AC233702.5-201ENST00000584107 538 ntBASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 AC124016.1-201ENST00000609552 612 ntBASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 AC010331.1-201ENST00000611423 582 ntBASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
FOXR1Q6PIV2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 AC120498.8-201ENST00000614275 531 ntBASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 TEX21P-204ENST00000641479 1693 ntBASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 KRT8P36-201ENST00000489121 1440 ntBASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 AC087633.2-202ENST00000565166 1439 ntBASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXR1Q6PIV2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms