Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 AC104390.1-201ENST00000555663 520 ntBASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 MIR3917-201ENST00000580971 93 ntBASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 AP000550.4-202ENST00000639755 178 ntBASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SWSAP1Q6NVH7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 HBZP1-201ENST00000354915 429 ntBASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 AL136038.3-201ENST00000561909 1096 ntBASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SWSAP1Q6NVH7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.83■□□□□ 0.92
SWSAP1Q6NVH7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SWSAP1Q6NVH7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SWSAP1Q6NVH7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SWSAP1Q6NVH7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SWSAP1Q6NVH7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SWSAP1Q6NVH7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SWSAP1Q6NVH7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SWSAP1Q6NVH7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SWSAP1Q6NVH7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 UPK3BP1-201ENST00000428678 509 ntBASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 SPDYE13P-201ENST00000445314 798 ntBASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 VENTXP5-201ENST00000523979 775 ntBASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 AC079602.3-201ENST00000623931 403 ntBASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 MTMR9LP-203ENST00000426597 1545 ntBASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 IER3-202ENST00000376377 1350 ntBASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SWSAP1Q6NVH7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 Z98044.1-201ENST00000632503 1764 ntBASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms