Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 AC009065.1-201ENST00000564055 1225 ntBASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD4Q5XG99 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
LYSMD4Q5XG99 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LYSMD4Q5XG99 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD4Q5XG99 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD4Q5XG99 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD4Q5XG99 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD4Q5XG99 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD4Q5XG99 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LYSMD4Q5XG99 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.33■□□□□ 0.53
LYSMD4Q5XG99 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 AC117500.6-201ENST00000624871 588 ntBASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LYSMD4Q5XG99 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 AL353692.3-201ENST00000407031 1396 ntBASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 PMS2P1-201ENST00000431037 1228 ntBASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 AF238378.1-201ENST00000526806 358 ntBASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 AP001005.1-201ENST00000571755 1248 ntBASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 AC011840.4-201ENST00000578471 627 ntBASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LYSMD4Q5XG99 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 AP005901.3-202ENST00000581653 237 ntBASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.31■□□□□ 0.52
LYSMD4Q5XG99 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms