Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 AP000997.3-201ENST00000623333 2250 ntBASIC20.5■□□□□ 0.87
CDKAL1Q5VV42 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 AC006058.3-201ENST00000606217 1069 ntBASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDKAL1Q5VV42 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 AL109659.2-201ENST00000606809 1674 ntBASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 MYLKP1-201ENST00000509077 1580 ntBASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 AC011506.1-201ENST00000474329 610 ntBASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 AL031985.4-201ENST00000642138 673 ntBASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKAL1Q5VV42 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 AL353807.1-201ENST00000427475 662 ntBASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKAL1Q5VV42 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKAL1Q5VV42 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms