Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC28.31■■■□□ 2.12
CDC42BPAQ5VT25 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
CDC42BPAQ5VT25 ABR-217ENST00000572441 563 ntTSL 4 BASIC28.31■■■□□ 2.12
CDC42BPAQ5VT25 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPAQ5VT25 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPAQ5VT25 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPAQ5VT25 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CDC42BPAQ5VT25 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 REEP1-209ENST00000541910 969 ntTSL 2 BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 AL773604.1-201ENST00000617417 272 ntBASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC28.3■■■□□ 2.12
CDC42BPAQ5VT25 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 GUSBP12-201ENST00000513727 720 ntBASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 CCNC-219ENST00000627680 896 ntTSL 5 BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 NFYC-AS1-201ENST00000606277 1687 ntBASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 AC018712.1-201ENST00000455767 687 ntBASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 AP001005.1-201ENST00000571755 1248 ntBASIC28.29■■■□□ 2.12
CDC42BPAQ5VT25 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 SLC25A1P1-201ENST00000528351 927 ntBASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
CDC42BPAQ5VT25 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 TEX30-205ENST00000376029 959 ntTSL 2 BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 BX640515.1-201ENST00000617215 977 ntBASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDC42BPAQ5VT25 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
CDC42BPAQ5VT25 IL9RP2-201ENST00000423948 1312 ntBASIC28.26■■■□□ 2.12
CDC42BPAQ5VT25 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
CDC42BPAQ5VT25 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC28.26■■■□□ 2.12
CDC42BPAQ5VT25 AC009065.1-201ENST00000564055 1225 ntBASIC28.26■■■□□ 2.12
CDC42BPAQ5VT25 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 AP000593.1-201ENST00000393668 712 ntBASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 NME4-212ENST00000621774 904 ntTSL 3 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPAQ5VT25 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 AC113404.2-201ENST00000507884 177 ntBASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms