Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LGSNQ5TDP6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
LGSNQ5TDP6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 NCF1B-203ENST00000435988 1254 ntBASIC18.89■□□□□ 0.61
LGSNQ5TDP6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 RCC2P6-201ENST00000526625 1557 ntBASIC18.89■□□□□ 0.61
LGSNQ5TDP6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.89■□□□□ 0.61
LGSNQ5TDP6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 GUSBP6-202ENST00000438529 1198 ntBASIC18.88■□□□□ 0.61
LGSNQ5TDP6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.88■□□□□ 0.61
LGSNQ5TDP6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.88■□□□□ 0.61
LGSNQ5TDP6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LGSNQ5TDP6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 NBPF21P-201ENST00000425093 1451 ntBASIC18.87■□□□□ 0.61
LGSNQ5TDP6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 AL138781.1-201ENST00000566567 1274 ntBASIC18.87■□□□□ 0.61
LGSNQ5TDP6 C1QL1P1-201ENST00000568105 661 ntBASIC18.87■□□□□ 0.61
LGSNQ5TDP6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LGSNQ5TDP6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms