Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 AL512353.2-201ENST00000448759 1962 ntBASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 AL353807.1-201ENST00000427475 662 ntBASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 AL158047.1-201ENST00000445918 881 ntBASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 AL135905.2-201ENST00000584934 1404 ntBASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATPAF1Q5TC12 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ATPAF1Q5TC12 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
ATPAF1Q5TC12 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms