Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 GNAS-203ENST00000306120 1878 ntBASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 AC080038.1-201ENST00000611274 1154 ntBASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 MYC-208ENST00000641036 567 ntBASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 AC073111.5-205ENST00000641717 521 ntBASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 AC134043.2-201ENST00000624206 2238 ntBASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 MIR663A-201ENST00000385250 93 ntBASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00242Q5T6M2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 LINC00896-202ENST00000609602 2128 ntBASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms