Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SNAPC4Q5SXM2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC30.55■■■□□ 2.48
SNAPC4Q5SXM2 KATNBL1P6-202ENST00000562413 1466 ntBASIC30.55■■■□□ 2.48
SNAPC4Q5SXM2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SNAPC4Q5SXM2 AC007375.3-201ENST00000600936 2314 ntBASIC30.55■■■□□ 2.48
SNAPC4Q5SXM2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC30.55■■■□□ 2.48
SNAPC4Q5SXM2 RPS8P6-201ENST00000426177 609 ntBASIC30.55■■■□□ 2.48
SNAPC4Q5SXM2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC30.55■■■□□ 2.48
SNAPC4Q5SXM2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC30.55■■■□□ 2.48
SNAPC4Q5SXM2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 AC006333.2-201ENST00000607957 2099 ntBASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 AC034236.2-201ENST00000606662 1610 ntBASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 AC012640.2-201ENST00000561606 901 ntBASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 Z83851.2-201ENST00000609564 659 ntBASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SNAPC4Q5SXM2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 AC134684.3-201ENST00000641758 218 ntBASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SNAPC4Q5SXM2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 RCN1P2-201ENST00000398357 915 ntBASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 MTDHP3-201ENST00000594186 672 ntBASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SNAPC4Q5SXM2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC30.51■■■□□ 2.48
SNAPC4Q5SXM2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SNAPC4Q5SXM2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SNAPC4Q5SXM2 AC021087.4-201ENST00000563761 564 ntBASIC30.51■■■□□ 2.48
SNAPC4Q5SXM2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC30.51■■■□□ 2.48
SNAPC4Q5SXM2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
SNAPC4Q5SXM2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC30.51■■■□□ 2.47
SNAPC4Q5SXM2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SNAPC4Q5SXM2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
SNAPC4Q5SXM2 CYP51A1P1-201ENST00000492267 1507 ntBASIC30.51■■■□□ 2.47
SNAPC4Q5SXM2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 SART3-203ENST00000546611 1184 ntBASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SNAPC4Q5SXM2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 DNAJB3-202ENST00000449667 1266 ntBASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 AC112482.1-201ENST00000492080 688 ntBASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 AC040169.1-201ENST00000565382 521 ntBASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SNAPC4Q5SXM2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms