Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 AC093028.1-201ENST00000622998 982 ntBASIC16.2■□□□□ 0.18
LRRK2Q5S007 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 AC079834.2-201ENST00000609776 1949 ntBASIC16.2■□□□□ 0.18
LRRK2Q5S007 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 RPS2P28-201ENST00000314255 741 ntBASIC16.2■□□□□ 0.18
LRRK2Q5S007 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 COX20P2-201ENST00000452636 358 ntBASIC16.2■□□□□ 0.18
LRRK2Q5S007 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 AL162377.1-201ENST00000618844 1793 ntBASIC16.2■□□□□ 0.18
LRRK2Q5S007 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRRK2Q5S007 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRK2Q5S007 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 ALG1L5P-201ENST00000482043 771 ntBASIC16.19■□□□□ 0.18
LRRK2Q5S007 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 AC021087.4-201ENST00000563761 564 ntBASIC16.19■□□□□ 0.18
LRRK2Q5S007 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 KRT89P-201ENST00000620027 1478 ntBASIC16.19■□□□□ 0.18
LRRK2Q5S007 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRK2Q5S007 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRK2Q5S007 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 AC092720.2-201ENST00000602388 1665 ntBASIC16.18■□□□□ 0.18
LRRK2Q5S007 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 MIR4469-201ENST00000583919 79 ntBASIC16.18■□□□□ 0.18
LRRK2Q5S007 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRK2Q5S007 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRK2Q5S007 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRK2Q5S007 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRK2Q5S007 MIR3180-4-201ENST00000582223 153 ntBASIC16.17■□□□□ 0.18
LRRK2Q5S007 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms