Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.09■□□□□ 0.33
RBM48Q5RL73 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBM48Q5RL73 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
RBM48Q5RL73 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
RBM48Q5RL73 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RBM48Q5RL73 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
RBM48Q5RL73 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RBM48Q5RL73 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RBM48Q5RL73 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RBM48Q5RL73 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RBM48Q5RL73 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RBM48Q5RL73 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RBM48Q5RL73 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.08■□□□□ 0.32
RBM48Q5RL73 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBM48Q5RL73 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.07■□□□□ 0.32
RBM48Q5RL73 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.07■□□□□ 0.32
RBM48Q5RL73 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.07■□□□□ 0.32
RBM48Q5RL73 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 TSPY21P-201ENST00000433481 731 ntBASIC17.07■□□□□ 0.32
RBM48Q5RL73 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.07■□□□□ 0.32
RBM48Q5RL73 REXO1L9P-201ENST00000604264 2108 ntBASIC17.07■□□□□ 0.32
RBM48Q5RL73 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.07■□□□□ 0.32
RBM48Q5RL73 AL589743.5-201ENST00000616611 1050 ntBASIC17.07■□□□□ 0.32
RBM48Q5RL73 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RBM48Q5RL73 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RBM48Q5RL73 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.07■□□□□ 0.32
RBM48Q5RL73 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.07■□□□□ 0.32
RBM48Q5RL73 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RBM48Q5RL73 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBM48Q5RL73 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RBM48Q5RL73 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBM48Q5RL73 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBM48Q5RL73 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RBM48Q5RL73 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBM48Q5RL73 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.06■□□□□ 0.32
RBM48Q5RL73 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBM48Q5RL73 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms