Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB6CQ53S08 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB6CQ53S08 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB6CQ53S08 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RAB6CQ53S08 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB6CQ53S08 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 CCR12P-201ENST00000446203 998 ntBASIC19.46■□□□□ 0.71
RAB6CQ53S08 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 AC133561.5-201ENST00000635547 218 ntBASIC19.46■□□□□ 0.71
RAB6CQ53S08 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB6CQ53S08 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB6CQ53S08 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB6CQ53S08 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB6CQ53S08 MIR564-202ENST00000385049 94 ntBASIC19.45■□□□□ 0.7
RAB6CQ53S08 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RAB6CQ53S08 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB6CQ53S08 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB6CQ53S08 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB6CQ53S08 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.45■□□□□ 0.7
RAB6CQ53S08 AC012306.2-201ENST00000609350 630 ntBASIC19.45■□□□□ 0.7
RAB6CQ53S08 AC073912.3-201ENST00000624414 853 ntBASIC19.45■□□□□ 0.7
RAB6CQ53S08 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB6CQ53S08 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB6CQ53S08 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB6CQ53S08 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RAB6CQ53S08 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB6CQ53S08 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RAB6CQ53S08 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB6CQ53S08 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB6CQ53S08 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB6CQ53S08 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB6CQ53S08 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6CQ53S08 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6CQ53S08 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6CQ53S08 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6CQ53S08 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6CQ53S08 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6CQ53S08 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6CQ53S08 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.44■□□□□ 0.7
RAB6CQ53S08 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6CQ53S08 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 AC211429.1-201ENST00000415277 523 ntBASIC19.43■□□□□ 0.7
RAB6CQ53S08 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB6CQ53S08 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms