Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 TSPY23P-201ENST00000440136 739 ntBASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KHDC1Q4VXA5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 MIR1238-201ENST00000408483 83 ntBASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 AC097488.1-201ENST00000507834 756 ntBASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 DGCR10-201ENST00000609839 495 ntBASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KHDC1Q4VXA5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 BICD1-207ENST00000551848 1962 ntBASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 AC006333.2-201ENST00000607957 2099 ntBASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 SLC25A1P4-201ENST00000567977 778 ntBASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KHDC1Q4VXA5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 AL354751.1-201ENST00000412768 1863 ntBASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 FITM1-202ENST00000559294 800 ntBASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.92■□□□□ 0.62
KHDC1Q4VXA5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms