Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 ECEL1P2-202ENST00000465689 757 ntBASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 KRT8P45-201ENST00000414328 1447 ntBASIC19.68■□□□□ 0.74
PTPN20Q4JDL3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 LINC01568-207ENST00000641790 1380 ntBASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN20Q4JDL3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 AC128688.1-201ENST00000487626 519 ntBASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN20Q4JDL3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 KRT18P41-201ENST00000518924 1277 ntBASIC19.65■□□□□ 0.74
PTPN20Q4JDL3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms