Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 AL049812.1-201ENST00000432563 2267 ntBASIC22.42■■□□□ 1.18
PDS5AQ29RF7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 KRT89P-201ENST00000620027 1478 ntBASIC22.42■■□□□ 1.18
PDS5AQ29RF7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDS5AQ29RF7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 TSSC2-201ENST00000450217 709 ntBASIC22.41■■□□□ 1.18
PDS5AQ29RF7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC22.41■■□□□ 1.18
PDS5AQ29RF7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.41■■□□□ 1.18
PDS5AQ29RF7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
PDS5AQ29RF7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 BX276092.5-203ENST00000456199 560 ntBASIC22.4■■□□□ 1.18
PDS5AQ29RF7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 RNF126P1-202ENST00000569893 925 ntBASIC22.4■■□□□ 1.18
PDS5AQ29RF7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.4■■□□□ 1.18
PDS5AQ29RF7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDS5AQ29RF7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 MIR3180-1-201ENST00000580374 94 ntBASIC22.39■■□□□ 1.18
PDS5AQ29RF7 MIR3180-3-201ENST00000584616 94 ntBASIC22.39■■□□□ 1.18
PDS5AQ29RF7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.39■■□□□ 1.18
PDS5AQ29RF7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDS5AQ29RF7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.39■■□□□ 1.17
PDS5AQ29RF7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.39■■□□□ 1.17
PDS5AQ29RF7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.39■■□□□ 1.17
PDS5AQ29RF7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDS5AQ29RF7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDS5AQ29RF7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDS5AQ29RF7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDS5AQ29RF7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDS5AQ29RF7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.38■■□□□ 1.17
PDS5AQ29RF7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.38■■□□□ 1.17
PDS5AQ29RF7 CHCHD2P8-201ENST00000429873 447 ntBASIC22.38■■□□□ 1.17
PDS5AQ29RF7 KRT18P48-201ENST00000434763 852 ntBASIC22.38■■□□□ 1.17
PDS5AQ29RF7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.38■■□□□ 1.17
PDS5AQ29RF7 AP002383.4-201ENST00000442518 975 ntBASIC22.38■■□□□ 1.17
PDS5AQ29RF7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDS5AQ29RF7 AL390719.2-201ENST00000606993 987 ntBASIC22.38■■□□□ 1.17
PDS5AQ29RF7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms