Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.44■□□□□ 0.38
SYPL1Q16563 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SYPL1Q16563 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.44■□□□□ 0.38
SYPL1Q16563 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.44■□□□□ 0.38
SYPL1Q16563 AC142381.4-202ENST00000563973 229 ntBASIC17.44■□□□□ 0.38
SYPL1Q16563 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.44■□□□□ 0.38
SYPL1Q16563 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 AC018470.1-201ENST00000624790 3129 ntBASIC17.44■□□□□ 0.38
SYPL1Q16563 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 AL357033.4-201ENST00000617703 1807 ntBASIC17.44■□□□□ 0.38
SYPL1Q16563 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SYPL1Q16563 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.44■□□□□ 0.38
SYPL1Q16563 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYPL1Q16563 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SYPL1Q16563 AL354751.1-201ENST00000412768 1863 ntBASIC17.44■□□□□ 0.38
SYPL1Q16563 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SYPL1Q16563 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.43■□□□□ 0.38
SYPL1Q16563 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 AC098590.1-201ENST00000468126 897 ntBASIC17.43■□□□□ 0.38
SYPL1Q16563 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.43■□□□□ 0.38
SYPL1Q16563 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.43■□□□□ 0.38
SYPL1Q16563 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.43■□□□□ 0.38
SYPL1Q16563 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.43■□□□□ 0.38
SYPL1Q16563 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.43■□□□□ 0.38
SYPL1Q16563 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 CD177P1-201ENST00000606252 935 ntBASIC17.43■□□□□ 0.38
SYPL1Q16563 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.43■□□□□ 0.38
SYPL1Q16563 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.43■□□□□ 0.38
SYPL1Q16563 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SYPL1Q16563 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYPL1Q16563 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.43■□□□□ 0.38
SYPL1Q16563 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.43■□□□□ 0.38
SYPL1Q16563 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.43■□□□□ 0.38
SYPL1Q16563 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.42■□□□□ 0.38
SYPL1Q16563 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 RCC2P3-201ENST00000418112 1537 ntBASIC17.42■□□□□ 0.38
SYPL1Q16563 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.42■□□□□ 0.38
SYPL1Q16563 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.42■□□□□ 0.38
SYPL1Q16563 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SYPL1Q16563 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYPL1Q16563 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.42■□□□□ 0.38
SYPL1Q16563 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.42■□□□□ 0.38
SYPL1Q16563 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.42■□□□□ 0.38
SYPL1Q16563 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.42■□□□□ 0.38
SYPL1Q16563 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SYPL1Q16563 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.42■□□□□ 0.38
SYPL1Q16563 FSCN1P1-201ENST00000568912 1481 ntBASIC17.42■□□□□ 0.38
SYPL1Q16563 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.42■□□□□ 0.38
SYPL1Q16563 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYPL1Q16563 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SYPL1Q16563 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYPL1Q16563 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms