Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.91■□□□□ 0.3
RPS4XP62701 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.91■□□□□ 0.3
RPS4XP62701 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RPS4XP62701 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 AL354751.1-201ENST00000412768 1863 ntBASIC16.91■□□□□ 0.3
RPS4XP62701 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RPS4XP62701 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 TMPOP1-202ENST00000424642 1267 ntBASIC16.91■□□□□ 0.3
RPS4XP62701 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.91■□□□□ 0.3
RPS4XP62701 RBM17P1-201ENST00000453646 1190 ntBASIC16.91■□□□□ 0.3
RPS4XP62701 B3GAT3P1-201ENST00000471720 806 ntBASIC16.91■□□□□ 0.3
RPS4XP62701 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RPS4XP62701 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.91■□□□□ 0.3
RPS4XP62701 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
RPS4XP62701 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RPS4XP62701 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.91■□□□□ 0.3
RPS4XP62701 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RPS4XP62701 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RPS4XP62701 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.91■□□□□ 0.3
RPS4XP62701 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.91■□□□□ 0.3
RPS4XP62701 AL390961.4-201ENST00000623958 2535 ntBASIC16.91■□□□□ 0.3
RPS4XP62701 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RPS4XP62701 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.91■□□□□ 0.3
RPS4XP62701 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RPS4XP62701 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.9■□□□□ 0.3
RPS4XP62701 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
RPS4XP62701 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 MESTP1-201ENST00000404287 994 ntBASIC16.9■□□□□ 0.3
RPS4XP62701 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.9■□□□□ 0.3
RPS4XP62701 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.9■□□□□ 0.3
RPS4XP62701 REXO1L10P-201ENST00000615707 1290 ntBASIC16.9■□□□□ 0.3
RPS4XP62701 MIR6786-201ENST00000616843 113 ntBASIC16.9■□□□□ 0.3
RPS4XP62701 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RPS4XP62701 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.9■□□□□ 0.3
RPS4XP62701 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4XP62701 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4XP62701 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.89■□□□□ 0.3
RPS4XP62701 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.89■□□□□ 0.3
RPS4XP62701 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.89■□□□□ 0.3
RPS4XP62701 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RPS4XP62701 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RPS4XP62701 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RPS4XP62701 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS4XP62701 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4XP62701 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RPS4XP62701 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RPS4XP62701 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4XP62701 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS4XP62701 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4XP62701 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4XP62701 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4XP62701 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RPS4XP62701 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4XP62701 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 FAM207BP-201ENST00000447172 505 ntBASIC16.89■□□□□ 0.29
RPS4XP62701 AC011506.1-201ENST00000474329 610 ntBASIC16.89■□□□□ 0.29
RPS4XP62701 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS4XP62701 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.89■□□□□ 0.29
RPS4XP62701 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS4XP62701 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RPS4XP62701 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms