Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 ECEL1P3-201ENST00000427961 737 ntBASIC20.32■□□□□ 0.84
SNRPFP62306 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.32■□□□□ 0.84
SNRPFP62306 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.32■□□□□ 0.84
SNRPFP62306 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 SLC25A3P1-201ENST00000443844 931 ntBASIC20.32■□□□□ 0.84
SNRPFP62306 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRPFP62306 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.32■□□□□ 0.84
SNRPFP62306 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.32■□□□□ 0.84
SNRPFP62306 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 AC133561.5-201ENST00000635547 218 ntBASIC20.32■□□□□ 0.84
SNRPFP62306 KRT8P50-201ENST00000562022 1438 ntBASIC20.32■□□□□ 0.84
SNRPFP62306 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.32■□□□□ 0.84
SNRPFP62306 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SNRPFP62306 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SNRPFP62306 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPFP62306 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRPFP62306 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.31■□□□□ 0.84
SNRPFP62306 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.31■□□□□ 0.84
SNRPFP62306 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRPFP62306 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRPFP62306 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.31■□□□□ 0.84
SNRPFP62306 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 KRT18P23-201ENST00000435622 1283 ntBASIC20.31■□□□□ 0.84
SNRPFP62306 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRPFP62306 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.31■□□□□ 0.84
SNRPFP62306 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRPFP62306 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRPFP62306 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRPFP62306 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRPFP62306 AL138966.2-201ENST00000621997 464 ntBASIC20.31■□□□□ 0.84
SNRPFP62306 AC112497.1-201ENST00000624824 639 ntBASIC20.31■□□□□ 0.84
SNRPFP62306 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPFP62306 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNRPFP62306 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRPFP62306 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRPFP62306 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SNRPFP62306 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.3■□□□□ 0.84
SNRPFP62306 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SNRPFP62306 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.3■□□□□ 0.84
SNRPFP62306 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRPFP62306 AC104390.1-201ENST00000555663 520 ntBASIC20.3■□□□□ 0.84
SNRPFP62306 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.3■□□□□ 0.84
SNRPFP62306 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.3■□□□□ 0.84
SNRPFP62306 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRPFP62306 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRPFP62306 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRPFP62306 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SNRPFP62306 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SNRPFP62306 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPFP62306 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SNRPFP62306 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SNRPFP62306 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SNRPFP62306 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRPFP62306 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.29■□□□□ 0.84
SNRPFP62306 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms