Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.84■□□□□ 0.61
AP1S1P61966 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.84■□□□□ 0.61
AP1S1P61966 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.84■□□□□ 0.61
AP1S1P61966 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
AP1S1P61966 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.84■□□□□ 0.61
AP1S1P61966 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
AP1S1P61966 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.84■□□□□ 0.61
AP1S1P61966 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.84■□□□□ 0.61
AP1S1P61966 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.84■□□□□ 0.61
AP1S1P61966 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.84■□□□□ 0.61
AP1S1P61966 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.84■□□□□ 0.61
AP1S1P61966 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 KRT18P41-201ENST00000518924 1277 ntBASIC18.84■□□□□ 0.61
AP1S1P61966 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.84■□□□□ 0.61
AP1S1P61966 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.84■□□□□ 0.61
AP1S1P61966 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.84■□□□□ 0.61
AP1S1P61966 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.84■□□□□ 0.61
AP1S1P61966 AC112497.1-201ENST00000624824 639 ntBASIC18.84■□□□□ 0.61
AP1S1P61966 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.84■□□□□ 0.61
AP1S1P61966 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
AP1S1P61966 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.84■□□□□ 0.61
AP1S1P61966 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
AP1S1P61966 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP1S1P61966 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.83■□□□□ 0.61
AP1S1P61966 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.83■□□□□ 0.61
AP1S1P61966 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP1S1P61966 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.83■□□□□ 0.61
AP1S1P61966 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
AP1S1P61966 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP1S1P61966 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP1S1P61966 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP1S1P61966 KRT18P23-201ENST00000435622 1283 ntBASIC18.83■□□□□ 0.6
AP1S1P61966 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.83■□□□□ 0.6
AP1S1P61966 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.83■□□□□ 0.6
AP1S1P61966 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.83■□□□□ 0.6
AP1S1P61966 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP1S1P61966 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.83■□□□□ 0.6
AP1S1P61966 AC140113.3-201ENST00000605663 199 ntBASIC18.83■□□□□ 0.6
AP1S1P61966 AC139887.4-201ENST00000607877 719 ntBASIC18.83■□□□□ 0.6
AP1S1P61966 AC006011.2-201ENST00000621313 1158 ntBASIC18.83■□□□□ 0.6
AP1S1P61966 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.83■□□□□ 0.6
AP1S1P61966 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
AP1S1P61966 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
AP1S1P61966 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP1S1P61966 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP1S1P61966 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP1S1P61966 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
AP1S1P61966 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S1P61966 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
AP1S1P61966 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.82■□□□□ 0.6
AP1S1P61966 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.82■□□□□ 0.6
AP1S1P61966 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S1P61966 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.82■□□□□ 0.6
AP1S1P61966 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S1P61966 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S1P61966 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S1P61966 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
AP1S1P61966 AC117947.1-201ENST00000427448 529 ntBASIC18.82■□□□□ 0.6
AP1S1P61966 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.82■□□□□ 0.6
AP1S1P61966 YBX1P2-201ENST00000489612 999 ntBASIC18.82■□□□□ 0.6
AP1S1P61966 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.82■□□□□ 0.6
AP1S1P61966 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.82■□□□□ 0.6
AP1S1P61966 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
AP1S1P61966 AL023973.1-201ENST00000624619 620 ntBASIC18.82■□□□□ 0.6
AP1S1P61966 MYC-208ENST00000641036 567 ntBASIC18.82■□□□□ 0.6
AP1S1P61966 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S1P61966 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S1P61966 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S1P61966 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP1S1P61966 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP1S1P61966 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
AP1S1P61966 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
AP1S1P61966 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.81■□□□□ 0.6
AP1S1P61966 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP1S1P61966 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP1S1P61966 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP1S1P61966 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP1S1P61966 AP000593.1-201ENST00000393668 712 ntBASIC18.81■□□□□ 0.6
AP1S1P61966 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.81■□□□□ 0.6
AP1S1P61966 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.81■□□□□ 0.6
AP1S1P61966 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms