Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RPS3AP61247 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.54■□□□□ 0.4
RPS3AP61247 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPS3AP61247 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.54■□□□□ 0.4
RPS3AP61247 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RPS3AP61247 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RPS3AP61247 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.54■□□□□ 0.4
RPS3AP61247 SNORA78-201ENST00000459373 127 ntBASIC17.54■□□□□ 0.4
RPS3AP61247 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.54■□□□□ 0.4
RPS3AP61247 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.54■□□□□ 0.4
RPS3AP61247 MIR4785-201ENST00000585005 73 ntBASIC17.54■□□□□ 0.4
RPS3AP61247 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.54■□□□□ 0.4
RPS3AP61247 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.54■□□□□ 0.4
RPS3AP61247 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.54■□□□□ 0.4
RPS3AP61247 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
RPS3AP61247 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.54■□□□□ 0.4
RPS3AP61247 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPS3AP61247 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.53■□□□□ 0.4
RPS3AP61247 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RPS3AP61247 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RPS3AP61247 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 NIFKP9-201ENST00000419265 221 ntBASIC17.53■□□□□ 0.4
RPS3AP61247 AL596275.1-201ENST00000423464 877 ntBASIC17.53■□□□□ 0.4
RPS3AP61247 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.53■□□□□ 0.4
RPS3AP61247 KSR1P1-201ENST00000446298 240 ntBASIC17.53■□□□□ 0.4
RPS3AP61247 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.53■□□□□ 0.4
RPS3AP61247 AC113410.3-201ENST00000623366 203 ntBASIC17.53■□□□□ 0.4
RPS3AP61247 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.53■□□□□ 0.4
RPS3AP61247 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 KRT8P8-201ENST00000434750 1448 ntBASIC17.53■□□□□ 0.4
RPS3AP61247 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS3AP61247 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.53■□□□□ 0.4
RPS3AP61247 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPS3AP61247 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.52■□□□□ 0.4
RPS3AP61247 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
RPS3AP61247 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.52■□□□□ 0.4
RPS3AP61247 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RPS3AP61247 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RPS3AP61247 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPS3AP61247 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.52■□□□□ 0.4
RPS3AP61247 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.52■□□□□ 0.4
RPS3AP61247 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.52■□□□□ 0.4
RPS3AP61247 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.52■□□□□ 0.4
RPS3AP61247 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.52■□□□□ 0.4
RPS3AP61247 CD177P1-201ENST00000606252 935 ntBASIC17.52■□□□□ 0.4
RPS3AP61247 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RPS3AP61247 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.52■□□□□ 0.39
RPS3AP61247 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.52■□□□□ 0.39
RPS3AP61247 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 AL161938.1-201ENST00000569833 2180 ntBASIC17.52■□□□□ 0.39
RPS3AP61247 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS3AP61247 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.51■□□□□ 0.39
RPS3AP61247 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS3AP61247 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS3AP61247 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms