Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDC42P60953 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.13■□□□□ 0.33
CDC42P60953 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 BX276092.2-201ENST00000417668 665 ntBASIC17.13■□□□□ 0.33
CDC42P60953 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.13■□□□□ 0.33
CDC42P60953 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDC42P60953 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CDC42P60953 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDC42P60953 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
CDC42P60953 HEIH-201ENST00000623091 1652 ntBASIC17.13■□□□□ 0.33
CDC42P60953 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.13■□□□□ 0.33
CDC42P60953 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC42P60953 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.12■□□□□ 0.33
CDC42P60953 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CDC42P60953 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.12■□□□□ 0.33
CDC42P60953 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDC42P60953 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.12■□□□□ 0.33
CDC42P60953 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.12■□□□□ 0.33
CDC42P60953 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.12■□□□□ 0.33
CDC42P60953 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.12■□□□□ 0.33
CDC42P60953 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDC42P60953 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42P60953 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDC42P60953 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CDC42P60953 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CDC42P60953 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42P60953 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42P60953 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42P60953 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.11■□□□□ 0.33
CDC42P60953 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.11■□□□□ 0.33
CDC42P60953 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42P60953 MYC-208ENST00000641036 567 ntBASIC17.11■□□□□ 0.33
CDC42P60953 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42P60953 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CDC42P60953 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDC42P60953 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42P60953 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CDC42P60953 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42P60953 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42P60953 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42P60953 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CDC42P60953 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDC42P60953 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDC42P60953 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDC42P60953 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42P60953 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.1■□□□□ 0.33
CDC42P60953 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC42P60953 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42P60953 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDC42P60953 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDC42P60953 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42P60953 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms