Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 AL162727.3-201ENST00000635661 2787 ntBASIC16.45■□□□□ 0.22
DEFA3P59666 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
DEFA3P59666 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.45■□□□□ 0.22
DEFA3P59666 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
DEFA3P59666 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
DEFA3P59666 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
DEFA3P59666 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
DEFA3P59666 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.45■□□□□ 0.22
DEFA3P59666 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DEFA3P59666 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DEFA3P59666 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
DEFA3P59666 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DEFA3P59666 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DEFA3P59666 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.44■□□□□ 0.22
DEFA3P59666 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DEFA3P59666 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
DEFA3P59666 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DEFA3P59666 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
DEFA3P59666 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.44■□□□□ 0.22
DEFA3P59666 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.44■□□□□ 0.22
DEFA3P59666 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.44■□□□□ 0.22
DEFA3P59666 SERBP1P1-201ENST00000396021 1160 ntBASIC16.44■□□□□ 0.22
DEFA3P59666 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
DEFA3P59666 AC097381.1-201ENST00000429019 1296 ntBASIC16.44■□□□□ 0.22
DEFA3P59666 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.44■□□□□ 0.22
DEFA3P59666 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.44■□□□□ 0.22
DEFA3P59666 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.44■□□□□ 0.22
DEFA3P59666 AL358852.1-201ENST00000623174 1268 ntBASIC16.44■□□□□ 0.22
DEFA3P59666 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DEFA3P59666 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.44■□□□□ 0.22
DEFA3P59666 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DEFA3P59666 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
DEFA3P59666 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
DEFA3P59666 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
DEFA3P59666 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
DEFA3P59666 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
DEFA3P59666 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.43■□□□□ 0.22
DEFA3P59666 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.43■□□□□ 0.22
DEFA3P59666 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.43■□□□□ 0.22
DEFA3P59666 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.43■□□□□ 0.22
DEFA3P59666 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.43■□□□□ 0.22
DEFA3P59666 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.43■□□□□ 0.22
DEFA3P59666 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.43■□□□□ 0.22
DEFA3P59666 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.43■□□□□ 0.22
DEFA3P59666 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.43■□□□□ 0.22
DEFA3P59666 AC087633.2-202ENST00000565166 1439 ntBASIC16.43■□□□□ 0.22
DEFA3P59666 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 AL356309.3-201ENST00000624132 1934 ntBASIC16.43■□□□□ 0.22
DEFA3P59666 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DEFA3P59666 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.43■□□□□ 0.22
DEFA3P59666 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DEFA3P59666 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA3P59666 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA3P59666 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA3P59666 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA3P59666 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA3P59666 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA3P59666 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA3P59666 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DEFA3P59666 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms