Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CMC4P56277 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CMC4P56277 AC068587.9-201ENST00000641814 219 ntBASIC13.96□□□□□ -0.17
CMC4P56277 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CMC4P56277 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMC4P56277 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CMC4P56277 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.96□□□□□ -0.18
CMC4P56277 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CMC4P56277 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.96□□□□□ -0.18
CMC4P56277 AL161938.1-201ENST00000569833 2180 ntBASIC13.96□□□□□ -0.18
CMC4P56277 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CMC4P56277 BX323043.1-201ENST00000641006 1765 ntBASIC13.96□□□□□ -0.18
CMC4P56277 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CMC4P56277 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CMC4P56277 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.96□□□□□ -0.18
CMC4P56277 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.95□□□□□ -0.18
CMC4P56277 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.95□□□□□ -0.18
CMC4P56277 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.95□□□□□ -0.18
CMC4P56277 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 AC034236.2-201ENST00000606662 1610 ntBASIC13.95□□□□□ -0.18
CMC4P56277 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CMC4P56277 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.95□□□□□ -0.18
CMC4P56277 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.95□□□□□ -0.18
CMC4P56277 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.95□□□□□ -0.18
CMC4P56277 FAM87A-204ENST00000613235 858 ntBASIC13.95□□□□□ -0.18
CMC4P56277 AC008622.2-201ENST00000617006 1229 ntBASIC13.95□□□□□ -0.18
CMC4P56277 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.95□□□□□ -0.18
CMC4P56277 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.95□□□□□ -0.18
CMC4P56277 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CMC4P56277 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.95□□□□□ -0.18
CMC4P56277 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.95□□□□□ -0.18
CMC4P56277 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.95□□□□□ -0.18
CMC4P56277 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 SLC25A24-204ENST00000569674 2357 ntBASIC13.95□□□□□ -0.18
CMC4P56277 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC13.95□□□□□ -0.18
CMC4P56277 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.95□□□□□ -0.18
CMC4P56277 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMC4P56277 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CMC4P56277 HEIH-201ENST00000623091 1652 ntBASIC13.95□□□□□ -0.18
CMC4P56277 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.94□□□□□ -0.18
CMC4P56277 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.94□□□□□ -0.18
CMC4P56277 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.94□□□□□ -0.18
CMC4P56277 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 ECEL1P3-201ENST00000427961 737 ntBASIC13.94□□□□□ -0.18
CMC4P56277 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.94□□□□□ -0.18
CMC4P56277 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.94□□□□□ -0.18
CMC4P56277 AC112777.1-201ENST00000540175 1423 ntBASIC13.94□□□□□ -0.18
CMC4P56277 LINC01238-205ENST00000567549 1107 ntBASIC13.94□□□□□ -0.18
CMC4P56277 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.94□□□□□ -0.18
CMC4P56277 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.94□□□□□ -0.18
CMC4P56277 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CMC4P56277 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CMC4P56277 AC141257.4-201ENST00000634557 245 ntBASIC13.94□□□□□ -0.18
CMC4P56277 AC136944.6-201ENST00000634818 245 ntBASIC13.94□□□□□ -0.18
CMC4P56277 AC092865.7-201ENST00000641832 219 ntBASIC13.94□□□□□ -0.18
CMC4P56277 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CMC4P56277 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.94□□□□□ -0.18
CMC4P56277 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.94□□□□□ -0.18
CMC4P56277 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMC4P56277 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.94□□□□□ -0.18
CMC4P56277 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.93□□□□□ -0.18
CMC4P56277 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CMC4P56277 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CMC4P56277 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CMC4P56277 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.93□□□□□ -0.18
CMC4P56277 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CMC4P56277 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMC4P56277 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
CMC4P56277 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms