Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.73■□□□□ 0.43
NR1H2P55055 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NR1H2P55055 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NR1H2P55055 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NR1H2P55055 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NR1H2P55055 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.73■□□□□ 0.43
NR1H2P55055 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NR1H2P55055 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NR1H2P55055 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.73■□□□□ 0.43
NR1H2P55055 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H2P55055 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
NR1H2P55055 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 OR6D1P-202ENST00000641007 5290 ntBASIC17.72■□□□□ 0.43
NR1H2P55055 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H2P55055 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H2P55055 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
NR1H2P55055 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H2P55055 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.72■□□□□ 0.43
NR1H2P55055 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H2P55055 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NR1H2P55055 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H2P55055 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H2P55055 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H2P55055 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 AL162741.1-201ENST00000565563 1558 ntBASIC17.71■□□□□ 0.43
NR1H2P55055 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NR1H2P55055 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NR1H2P55055 AL139384.1-201ENST00000612143 3047 ntBASIC17.71■□□□□ 0.43
NR1H2P55055 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.71■□□□□ 0.43
NR1H2P55055 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.71■□□□□ 0.43
NR1H2P55055 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.71■□□□□ 0.43
NR1H2P55055 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NR1H2P55055 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NR1H2P55055 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NR1H2P55055 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.71■□□□□ 0.43
NR1H2P55055 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NR1H2P55055 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.71■□□□□ 0.43
NR1H2P55055 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H2P55055 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.71■□□□□ 0.42
NR1H2P55055 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
NR1H2P55055 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NR1H2P55055 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms