Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SMSP52788 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SMSP52788 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 AP006587.1-201ENST00000534129 1502 ntBASIC17.53■□□□□ 0.4
SMSP52788 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.53■□□□□ 0.4
SMSP52788 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.53■□□□□ 0.4
SMSP52788 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMSP52788 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SMSP52788 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.53■□□□□ 0.4
SMSP52788 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.53■□□□□ 0.4
SMSP52788 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.53■□□□□ 0.4
SMSP52788 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SMSP52788 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.53■□□□□ 0.4
SMSP52788 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.53■□□□□ 0.4
SMSP52788 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 DGCR10-201ENST00000609839 495 ntBASIC17.53■□□□□ 0.4
SMSP52788 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 AL031598.1-201ENST00000561511 1773 ntBASIC17.53■□□□□ 0.4
SMSP52788 Z98044.1-201ENST00000632503 1764 ntBASIC17.53■□□□□ 0.4
SMSP52788 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMSP52788 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.53■□□□□ 0.4
SMSP52788 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMSP52788 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.52■□□□□ 0.4
SMSP52788 AC005082.1-201ENST00000413042 2259 ntBASIC17.52■□□□□ 0.4
SMSP52788 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SMSP52788 AC104581.1-202ENST00000635932 2618 ntBASIC17.52■□□□□ 0.4
SMSP52788 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 AC009113.1-201ENST00000570267 2443 ntBASIC17.52■□□□□ 0.4
SMSP52788 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SMSP52788 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
SMSP52788 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.52■□□□□ 0.4
SMSP52788 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SMSP52788 EGLN1P1-201ENST00000531623 762 ntBASIC17.52■□□□□ 0.4
SMSP52788 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.52■□□□□ 0.4
SMSP52788 LINC01238-205ENST00000567549 1107 ntBASIC17.52■□□□□ 0.4
SMSP52788 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.52■□□□□ 0.4
SMSP52788 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.52■□□□□ 0.4
SMSP52788 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SMSP52788 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMSP52788 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.52■□□□□ 0.39
SMSP52788 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 AC093525.10-201ENST00000625130 1569 ntBASIC17.52■□□□□ 0.39
SMSP52788 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.52■□□□□ 0.39
SMSP52788 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
SMSP52788 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMSP52788 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.51■□□□□ 0.39
SMSP52788 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.51■□□□□ 0.39
SMSP52788 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.51■□□□□ 0.39
SMSP52788 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.51■□□□□ 0.39
SMSP52788 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.51■□□□□ 0.39
SMSP52788 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.51■□□□□ 0.39
SMSP52788 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.51■□□□□ 0.39
SMSP52788 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SMSP52788 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.51■□□□□ 0.39
SMSP52788 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SMSP52788 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.51■□□□□ 0.39
SMSP52788 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SMSP52788 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.51■□□□□ 0.39
SMSP52788 AP005242.2-201ENST00000580065 1175 ntBASIC17.51■□□□□ 0.39
SMSP52788 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms