Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLCNKAP51800 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCNKAP51800 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCNKAP51800 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLCNKAP51800 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 AC008556.1-201ENST00000610908 2040 ntBASIC18.34■□□□□ 0.53
CLCNKAP51800 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLCNKAP51800 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCNKAP51800 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CLCNKAP51800 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCNKAP51800 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCNKAP51800 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCNKAP51800 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCNKAP51800 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCNKAP51800 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCNKAP51800 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCNKAP51800 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCNKAP51800 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCNKAP51800 AC068587.9-201ENST00000641814 219 ntBASIC18.34■□□□□ 0.53
CLCNKAP51800 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CLCNKAP51800 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCNKAP51800 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLCNKAP51800 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCNKAP51800 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLCNKAP51800 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.33■□□□□ 0.53
CLCNKAP51800 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CLCNKAP51800 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
CLCNKAP51800 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCNKAP51800 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCNKAP51800 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCNKAP51800 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCNKAP51800 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCNKAP51800 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCNKAP51800 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCNKAP51800 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCNKAP51800 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCNKAP51800 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCNKAP51800 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCNKAP51800 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCNKAP51800 MIR564-202ENST00000385049 94 ntBASIC18.33■□□□□ 0.52
CLCNKAP51800 STARP1-201ENST00000397973 869 ntBASIC18.33■□□□□ 0.52
CLCNKAP51800 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCNKAP51800 AC092647.4-201ENST00000457211 535 ntBASIC18.33■□□□□ 0.52
CLCNKAP51800 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.33■□□□□ 0.52
CLCNKAP51800 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCNKAP51800 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CLCNKAP51800 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCNKAP51800 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCNKAP51800 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CLCNKAP51800 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCNKAP51800 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CLCNKAP51800 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLCNKAP51800 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCNKAP51800 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CLCNKAP51800 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCNKAP51800 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 ARMC10P1-201ENST00000313754 855 ntBASIC18.32■□□□□ 0.52
CLCNKAP51800 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCNKAP51800 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CLCNKAP51800 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.32■□□□□ 0.52
CLCNKAP51800 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCNKAP51800 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.32■□□□□ 0.52
CLCNKAP51800 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCNKAP51800 GCSHP2-201ENST00000560971 527 ntBASIC18.32■□□□□ 0.52
CLCNKAP51800 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.32■□□□□ 0.52
CLCNKAP51800 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CLCNKAP51800 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CLCNKAP51800 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.32■□□□□ 0.52
CLCNKAP51800 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCNKAP51800 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CLCNKAP51800 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CLCNKAP51800 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms