Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.61■□□□□ 0.25
SRP9P49458 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.61■□□□□ 0.25
SRP9P49458 UBE2SP1-201ENST00000450587 669 ntBASIC16.61■□□□□ 0.25
SRP9P49458 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 KRT18P16-201ENST00000510337 1294 ntBASIC16.61■□□□□ 0.25
SRP9P49458 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SRP9P49458 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.61■□□□□ 0.25
SRP9P49458 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.61■□□□□ 0.25
SRP9P49458 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.61■□□□□ 0.25
SRP9P49458 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.61■□□□□ 0.25
SRP9P49458 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.61■□□□□ 0.25
SRP9P49458 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.61■□□□□ 0.25
SRP9P49458 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRP9P49458 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRP9P49458 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SRP9P49458 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.61■□□□□ 0.25
SRP9P49458 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.61■□□□□ 0.25
SRP9P49458 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRP9P49458 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SRP9P49458 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.61■□□□□ 0.25
SRP9P49458 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRP9P49458 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
SRP9P49458 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.6■□□□□ 0.25
SRP9P49458 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SRP9P49458 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SRP9P49458 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SRP9P49458 AC099398.1-201ENST00000567919 2776 ntBASIC16.6■□□□□ 0.25
SRP9P49458 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SRP9P49458 AC098590.1-201ENST00000468126 897 ntBASIC16.6■□□□□ 0.25
SRP9P49458 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.6■□□□□ 0.25
SRP9P49458 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.6■□□□□ 0.25
SRP9P49458 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.6■□□□□ 0.25
SRP9P49458 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.6■□□□□ 0.25
SRP9P49458 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.6■□□□□ 0.25
SRP9P49458 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.6■□□□□ 0.25
SRP9P49458 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.6■□□□□ 0.25
SRP9P49458 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.6■□□□□ 0.25
SRP9P49458 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.6■□□□□ 0.25
SRP9P49458 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SRP9P49458 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SRP9P49458 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRP9P49458 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SRP9P49458 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.59■□□□□ 0.25
SRP9P49458 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SRP9P49458 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SRP9P49458 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.59■□□□□ 0.25
SRP9P49458 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SRP9P49458 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.59■□□□□ 0.25
SRP9P49458 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.59■□□□□ 0.25
SRP9P49458 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.59■□□□□ 0.25
SRP9P49458 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.59■□□□□ 0.25
SRP9P49458 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SRP9P49458 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SRP9P49458 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.59■□□□□ 0.25
SRP9P49458 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.59■□□□□ 0.25
SRP9P49458 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRP9P49458 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SRP9P49458 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
SRP9P49458 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.58■□□□□ 0.25
SRP9P49458 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SRP9P49458 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SRP9P49458 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
SRP9P49458 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SRP9P49458 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRP9P49458 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms