Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.47■□□□□ 0.23
CX3CR1P49238 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.47■□□□□ 0.23
CX3CR1P49238 AL031985.4-201ENST00000642138 673 ntBASIC16.47■□□□□ 0.23
CX3CR1P49238 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.47■□□□□ 0.23
CX3CR1P49238 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.47■□□□□ 0.23
CX3CR1P49238 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CX3CR1P49238 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.47■□□□□ 0.23
CX3CR1P49238 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.47■□□□□ 0.23
CX3CR1P49238 HEIH-201ENST00000623091 1652 ntBASIC16.46■□□□□ 0.23
CX3CR1P49238 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CX3CR1P49238 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CX3CR1P49238 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.46■□□□□ 0.23
CX3CR1P49238 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.46■□□□□ 0.23
CX3CR1P49238 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
CX3CR1P49238 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.46■□□□□ 0.23
CX3CR1P49238 KRT18P29-201ENST00000397031 1267 ntBASIC16.46■□□□□ 0.23
CX3CR1P49238 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CX3CR1P49238 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.46■□□□□ 0.23
CX3CR1P49238 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CX3CR1P49238 AC026271.3-201ENST00000571884 352 ntBASIC16.46■□□□□ 0.23
CX3CR1P49238 AC073195.1-201ENST00000607241 877 ntBASIC16.46■□□□□ 0.23
CX3CR1P49238 AC011298.2-201ENST00000617989 482 ntBASIC16.46■□□□□ 0.23
CX3CR1P49238 AL359736.2-201ENST00000621992 437 ntBASIC16.46■□□□□ 0.23
CX3CR1P49238 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CX3CR1P49238 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 HTR7P1-202ENST00000624664 4411 ntBASIC16.46■□□□□ 0.23
CX3CR1P49238 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CX3CR1P49238 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CX3CR1P49238 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CX3CR1P49238 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.46■□□□□ 0.22
CX3CR1P49238 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CX3CR1P49238 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.45■□□□□ 0.22
CX3CR1P49238 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.45■□□□□ 0.22
CX3CR1P49238 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.45■□□□□ 0.22
CX3CR1P49238 TSPY20P-201ENST00000450910 630 ntBASIC16.45■□□□□ 0.22
CX3CR1P49238 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.45■□□□□ 0.22
CX3CR1P49238 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.45■□□□□ 0.22
CX3CR1P49238 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.45■□□□□ 0.22
CX3CR1P49238 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.45■□□□□ 0.22
CX3CR1P49238 ITM2C-210ENST00000620962 501 ntBASIC16.45■□□□□ 0.22
CX3CR1P49238 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CX3CR1P49238 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.45■□□□□ 0.22
CX3CR1P49238 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.45■□□□□ 0.22
CX3CR1P49238 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CX3CR1P49238 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CX3CR1P49238 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CX3CR1P49238 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.45■□□□□ 0.22
CX3CR1P49238 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.45■□□□□ 0.22
CX3CR1P49238 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.44■□□□□ 0.22
CX3CR1P49238 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.44■□□□□ 0.22
CX3CR1P49238 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.44■□□□□ 0.22
CX3CR1P49238 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CX3CR1P49238 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CX3CR1P49238 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.44■□□□□ 0.22
CX3CR1P49238 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CX3CR1P49238 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.44■□□□□ 0.22
CX3CR1P49238 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CX3CR1P49238 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CX3CR1P49238 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.44■□□□□ 0.22
CX3CR1P49238 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms