Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRCC3P46736 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
BRCC3P46736 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
BRCC3P46736 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
BRCC3P46736 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
BRCC3P46736 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BRCC3P46736 AC034236.2-201ENST00000606662 1610 ntBASIC19.91■□□□□ 0.78
BRCC3P46736 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
BRCC3P46736 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRCC3P46736 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRCC3P46736 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
BRCC3P46736 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BRCC3P46736 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
BRCC3P46736 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRCC3P46736 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
BRCC3P46736 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRCC3P46736 HLA-F-220ENST00000434407 884 ntBASIC19.91■□□□□ 0.78
BRCC3P46736 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.91■□□□□ 0.78
BRCC3P46736 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.91■□□□□ 0.78
BRCC3P46736 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.91■□□□□ 0.78
BRCC3P46736 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRCC3P46736 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.91■□□□□ 0.78
BRCC3P46736 KRT8P7-201ENST00000533003 1432 ntBASIC19.91■□□□□ 0.78
BRCC3P46736 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRCC3P46736 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRCC3P46736 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.9■□□□□ 0.78
BRCC3P46736 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRCC3P46736 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRCC3P46736 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.9■□□□□ 0.78
BRCC3P46736 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRCC3P46736 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRCC3P46736 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.9■□□□□ 0.78
BRCC3P46736 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRCC3P46736 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRCC3P46736 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.9■□□□□ 0.78
BRCC3P46736 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.9■□□□□ 0.78
BRCC3P46736 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.9■□□□□ 0.78
BRCC3P46736 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.9■□□□□ 0.78
BRCC3P46736 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRCC3P46736 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRCC3P46736 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRCC3P46736 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRCC3P46736 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BRCC3P46736 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRCC3P46736 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BRCC3P46736 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
BRCC3P46736 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
BRCC3P46736 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BRCC3P46736 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCC3P46736 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BRCC3P46736 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCC3P46736 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCC3P46736 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCC3P46736 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.89■□□□□ 0.77
BRCC3P46736 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCC3P46736 HCG4P8-203ENST00000443049 980 ntBASIC19.89■□□□□ 0.77
BRCC3P46736 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
BRCC3P46736 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.89■□□□□ 0.77
BRCC3P46736 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.89■□□□□ 0.77
BRCC3P46736 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.89■□□□□ 0.77
BRCC3P46736 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCC3P46736 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
BRCC3P46736 AL357033.4-201ENST00000617703 1807 ntBASIC19.89■□□□□ 0.77
BRCC3P46736 HEIH-201ENST00000623091 1652 ntBASIC19.89■□□□□ 0.77
BRCC3P46736 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.89■□□□□ 0.77
BRCC3P46736 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCC3P46736 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
BRCC3P46736 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.88■□□□□ 0.77
BRCC3P46736 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.88■□□□□ 0.77
BRCC3P46736 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.88■□□□□ 0.77
BRCC3P46736 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.88■□□□□ 0.77
BRCC3P46736 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.88■□□□□ 0.77
BRCC3P46736 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.88■□□□□ 0.77
BRCC3P46736 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 Z98044.1-201ENST00000632503 1764 ntBASIC19.88■□□□□ 0.77
BRCC3P46736 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRCC3P46736 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.87■□□□□ 0.77
BRCC3P46736 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRCC3P46736 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.87■□□□□ 0.77
BRCC3P46736 AL162741.1-201ENST00000565563 1558 ntBASIC19.87■□□□□ 0.77
BRCC3P46736 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRCC3P46736 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRCC3P46736 MTMR9LP-203ENST00000426597 1545 ntBASIC19.87■□□□□ 0.77
BRCC3P46736 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.87■□□□□ 0.77
BRCC3P46736 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRCC3P46736 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.87■□□□□ 0.77
BRCC3P46736 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRCC3P46736 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.87■□□□□ 0.77
BRCC3P46736 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.87■□□□□ 0.77
BRCC3P46736 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms